Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col20a1Q923P0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.79■□□□□ 0.44
Col20a1Q923P0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col20a1Q923P0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.78■□□□□ 0.44
Col20a1Q923P0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.78■□□□□ 0.44
Col20a1Q923P0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.78■□□□□ 0.44
Col20a1Q923P0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.78■□□□□ 0.44
Col20a1Q923P0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.78■□□□□ 0.44
Col20a1Q923P0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col20a1Q923P0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col20a1Q923P0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col20a1Q923P0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col20a1Q923P0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col20a1Q923P0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col20a1Q923P0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col20a1Q923P0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.76■□□□□ 0.43
Col20a1Q923P0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.76■□□□□ 0.43
Col20a1Q923P0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms