Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha9Q91Y11 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Gm12260-201ENSMUST00000122447 411 ntBASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha9Q91Y11 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Gm5177-201ENSMUST00000183092 997 ntBASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Gm27525-201ENSMUST00000184465 107 ntBASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Mir8117-201ENSMUST00000184773 107 ntBASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha9Q91Y11 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha9Q91Y11 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha9Q91Y11 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms