Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Efs-202ENSMUST00000227037 2540 ntBASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb1Q91Y08 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Mir5131-201ENSMUST00000175426 93 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Mir5126-201ENSMUST00000175513 77 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.68■□□□□ 0.1
Pcdhb1Q91Y08 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms