Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Gm16570-201ENSMUST00000161951 436 ntBASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg4Q8VHY0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm37424-201ENSMUST00000191727 561 ntBASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg4Q8VHY0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Gm42693-201ENSMUST00000196779 631 ntBASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg4Q8VHY0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Gm15236-201ENSMUST00000117309 379 ntBASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Gm7775-201ENSMUST00000218871 853 ntBASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Gm10478-201ENSMUST00000084451 396 ntBASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms