Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lsm1Q8VC85 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Gm10499-201ENSMUST00000174094 934 ntBASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Gm4535-201ENSMUST00000182274 558 ntBASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Gm10355-201ENSMUST00000097146 517 ntBASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm1Q8VC85 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm1Q8VC85 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.47□□□□□ -0.09
Lsm1Q8VC85 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Lsm1Q8VC85 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms