Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpap2Q8VC34 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.57■□□□□ 0.24
Rpap2Q8VC34 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Gm12008-201ENSMUST00000117791 755 ntBASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rpap2Q8VC34 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Gm13597-201ENSMUST00000121239 375 ntBASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpap2Q8VC34 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms