Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Gm10305-201ENSMUST00000195331 2475 ntBASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc9Q8VC31 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Gm37844-201ENSMUST00000192473 4097 ntBASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc9Q8VC31 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.21■□□□□ 0.5
Ccdc9Q8VC31 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.21■□□□□ 0.5
Ccdc9Q8VC31 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Gm22240-201ENSMUST00000175225 82 ntBASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Gm27011-201ENSMUST00000182352 972 ntBASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc9Q8VC31 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc9Q8VC31 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Gm10517-202ENSMUST00000192970 758 ntBASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc9Q8VC31 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms