Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmc1Q8R4P5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Tmc1Q8R4P5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmc1Q8R4P5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Carlr-201ENSMUST00000181515 2574 ntBASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Gm6443-201ENSMUST00000203599 874 ntBASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tmc1Q8R4P5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Rprl3-201ENSMUST00000157400 290 ntBASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Gm9172-201ENSMUST00000212092 954 ntBASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Sybu-209ENSMUST00000228639 4113 ntBASIC18.47■□□□□ 0.55
Tmc1Q8R4P5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Tmc1Q8R4P5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tmc1Q8R4P5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gm43514-201ENSMUST00000198852 424 ntBASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Tmc1Q8R4P5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms