Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nudcd3Q8R1N4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Gm45328-201ENSMUST00000210942 917 ntBASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nudcd3Q8R1N4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Grk6-207ENSMUST00000225925 2769 ntBASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Gm9172-201ENSMUST00000212092 954 ntBASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nudcd3Q8R1N4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nudcd3Q8R1N4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms