Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shisa4Q8CA71 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.48■□□□□ 0.39
Shisa4Q8CA71 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Gm13365-201ENSMUST00000121188 973 ntBASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Gm43438-201ENSMUST00000198133 379 ntBASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shisa4Q8CA71 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Gm8396-201ENSMUST00000057361 823 ntBASIC17.46■□□□□ 0.39
Shisa4Q8CA71 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shisa4Q8CA71 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shisa4Q8CA71 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gm17271-201ENSMUST00000165535 355 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms