Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Gm7222-201ENSMUST00000117512 906 ntBASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm7230-201ENSMUST00000173026 815 ntBASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm27646-201ENSMUST00000183989 110 ntBASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn3Q8BHH8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.21□□□□□ -0.14
Clrn3Q8BHH8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn3Q8BHH8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn3Q8BHH8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn3Q8BHH8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn3Q8BHH8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Gm7862-201ENSMUST00000121461 292 ntBASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Gm18195-201ENSMUST00000207604 706 ntBASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn3Q8BHH8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms