Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf40bQ80W14 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Gm13823-201ENSMUST00000119930 345 ntBASIC17.43■□□□□ 0.38
Prpf40bQ80W14 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prpf40bQ80W14 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Gm14127-201ENSMUST00000117906 678 ntBASIC17.42■□□□□ 0.38
Prpf40bQ80W14 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prpf40bQ80W14 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.41■□□□□ 0.38
Prpf40bQ80W14 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prpf40bQ80W14 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms