Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Prob1-201ENSMUST00000097619 3021 ntBASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh19Q80TF3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Sybu-209ENSMUST00000228639 4113 ntBASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh19Q80TF3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Gm25925-201ENSMUST00000158314 306 ntBASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh19Q80TF3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms