Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb4Q6P8W9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hmgb4Q6P8W9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb4Q6P8W9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb4Q6P8W9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb4Q6P8W9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb4Q6P8W9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb4Q6P8W9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Gm45747-201ENSMUST00000212203 999 ntBASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb4Q6P8W9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms