Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf6Q6NVF9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gm6089-201ENSMUST00000197666 938 ntBASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Efs-202ENSMUST00000227037 2540 ntBASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf6Q6NVF9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm25990-201ENSMUST00000102440 86 ntBASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf6Q6NVF9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms