Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox17Q61473 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Sox17Q61473 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.19□□□□□ -0.14
Sox17Q61473 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox17Q61473 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox17Q61473 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox17Q61473 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox17Q61473 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox17Q61473 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox17Q61473 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.18□□□□□ -0.14
Sox17Q61473 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox17Q61473 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.18□□□□□ -0.14
Sox17Q61473 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Sox17Q61473 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.18□□□□□ -0.14
Sox17Q61473 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox17Q61473 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Sox17Q61473 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Sox17Q61473 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm6623-201ENSMUST00000173570 544 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm8825-201ENSMUST00000182565 998 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm4518-201ENSMUST00000182638 718 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox17Q61473 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox17Q61473 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sox17Q61473 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.17□□□□□ -0.14
Sox17Q61473 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Sox17Q61473 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox17Q61473 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox17Q61473 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Sox17Q61473 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms