Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccne1Q61457 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccne1Q61457 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ccne1Q61457 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.57■□□□□ 0.72
Ccne1Q61457 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gm25144-201ENSMUST00000179561 110 ntBASIC19.57■□□□□ 0.72
Ccne1Q61457 Gm25352-201ENSMUST00000179815 110 ntBASIC19.57■□□□□ 0.72
Ccne1Q61457 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccne1Q61457 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccne1Q61457 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccne1Q61457 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.56■□□□□ 0.72
Ccne1Q61457 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccne1Q61457 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.56■□□□□ 0.72
Ccne1Q61457 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccne1Q61457 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccne1Q61457 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccne1Q61457 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccne1Q61457 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccne1Q61457 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ccne1Q61457 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.55■□□□□ 0.72
Ccne1Q61457 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Mir7684-201ENSMUST00000183858 60 ntBASIC19.55■□□□□ 0.72
Ccne1Q61457 Gm9063-201ENSMUST00000223299 582 ntBASIC19.55■□□□□ 0.72
Ccne1Q61457 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccne1Q61457 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ccne1Q61457 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccne1Q61457 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccne1Q61457 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.54■□□□□ 0.72
Ccne1Q61457 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccne1Q61457 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.53■□□□□ 0.72
Ccne1Q61457 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Prob1-201ENSMUST00000097619 3021 ntBASIC19.53■□□□□ 0.72
Ccne1Q61457 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Gm13823-201ENSMUST00000119930 345 ntBASIC19.53■□□□□ 0.72
Ccne1Q61457 Gm27533-201ENSMUST00000183800 152 ntBASIC19.53■□□□□ 0.72
Ccne1Q61457 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccne1Q61457 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccne1Q61457 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms