Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.45□□□□□ -0.1
Xrcc1Q60596 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Xrcc1Q60596 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Xrcc1Q60596 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Mir8117-201ENSMUST00000184773 107 ntBASIC14.43□□□□□ -0.1
Xrcc1Q60596 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.43□□□□□ -0.1
Xrcc1Q60596 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.43□□□□□ -0.1
Xrcc1Q60596 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xrcc1Q60596 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.42□□□□□ -0.1
Xrcc1Q60596 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Asic1-205ENSMUST00000228185 1818 ntBASIC14.42□□□□□ -0.1
Xrcc1Q60596 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Xrcc1Q60596 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.42□□□□□ -0.1
Xrcc1Q60596 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xrcc1Q60596 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms