Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Gm5479-201ENSMUST00000160578 435 ntBASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav8d-2Q5R1B6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav8d-2Q5R1B6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Gm18062-201ENSMUST00000208020 547 ntBASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Gm18055-201ENSMUST00000208254 547 ntBASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Gm15823-201ENSMUST00000064305 670 ntBASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms