Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm13616-201ENSMUST00000120600 222 ntBASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Gm43767-201ENSMUST00000198933 381 ntBASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rc3h1Q4VGL6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rc3h1Q4VGL6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Rc3h1Q4VGL6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rc3h1Q4VGL6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 BC037039-201ENSMUST00000192003 2205 ntBASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Auts2-212ENSMUST00000178555 309 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms