Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm8825-201ENSMUST00000182565 998 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm4518-201ENSMUST00000182638 718 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm18101-201ENSMUST00000215769 548 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.35■□□□□ 0.05
Cnga4Q3UW12 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.35■□□□□ 0.05
Cnga4Q3UW12 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnga4Q3UW12 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cnga4Q3UW12 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Gm23547-201ENSMUST00000158210 271 ntBASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnga4Q3UW12 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnga4Q3UW12 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnga4Q3UW12 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnga4Q3UW12 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnga4Q3UW12 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms