Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm2810-201ENSMUST00000118681 990 ntBASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm11543-201ENSMUST00000120758 370 ntBASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm10576-201ENSMUST00000191927 825 ntBASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm44872-201ENSMUST00000207864 420 ntBASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snx27Q3UHD6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Gm10253-201ENSMUST00000194270 940 ntBASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Gm7774-201ENSMUST00000200064 533 ntBASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Snx27Q3UHD6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Snx27Q3UHD6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Gm18737-201ENSMUST00000173594 937 ntBASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Snx27Q3UHD6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms