Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm7063-201ENSMUST00000186840 981 ntBASIC18.81■□□□□ 0.6
Col1a2Q01149 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.81■□□□□ 0.6
Col1a2Q01149 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.81■□□□□ 0.6
Col1a2Q01149 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col1a2Q01149 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col1a2Q01149 BC037039-201ENSMUST00000192003 2205 ntBASIC18.8■□□□□ 0.6
Col1a2Q01149 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Col1a2Q01149 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.8■□□□□ 0.6
Col1a2Q01149 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col1a2Q01149 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.79■□□□□ 0.6
Col1a2Q01149 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Col1a2Q01149 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Col1a2Q01149 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.79■□□□□ 0.6
Col1a2Q01149 Gm13823-201ENSMUST00000119930 345 ntBASIC18.79■□□□□ 0.6
Col1a2Q01149 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.79■□□□□ 0.6
Col1a2Q01149 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col1a2Q01149 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Gm25144-201ENSMUST00000179561 110 ntBASIC18.78■□□□□ 0.6
Col1a2Q01149 Gm25352-201ENSMUST00000179815 110 ntBASIC18.78■□□□□ 0.6
Col1a2Q01149 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col1a2Q01149 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col1a2Q01149 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Col1a2Q01149 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col1a2Q01149 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms