Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn1bP97952 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Scn1bP97952 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Scn1bP97952 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.84□□□□□ -0.19
Scn1bP97952 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Mir5130-201ENSMUST00000175160 84 ntBASIC13.84□□□□□ -0.19
Scn1bP97952 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.84□□□□□ -0.19
Scn1bP97952 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn1bP97952 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1bP97952 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1bP97952 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Scn1bP97952 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Scn1bP97952 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.83□□□□□ -0.2
Scn1bP97952 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.83□□□□□ -0.2
Scn1bP97952 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.83□□□□□ -0.2
Scn1bP97952 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Gm10566-201ENSMUST00000086739 996 ntBASIC13.83□□□□□ -0.2
Scn1bP97952 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn1bP97952 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn1bP97952 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn1bP97952 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1bP97952 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.82□□□□□ -0.2
Scn1bP97952 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn1bP97952 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.82□□□□□ -0.2
Scn1bP97952 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn1bP97952 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.82□□□□□ -0.2
Scn1bP97952 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scn1bP97952 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn1bP97952 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn1bP97952 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms