Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.29□□□□□ -0.12
Nkx3-2P97503 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Gm43575-201ENSMUST00000196420 516 ntBASIC14.29□□□□□ -0.12
Nkx3-2P97503 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.29□□□□□ -0.12
Nkx3-2P97503 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.29□□□□□ -0.12
Nkx3-2P97503 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.29□□□□□ -0.12
Nkx3-2P97503 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx3-2P97503 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nkx3-2P97503 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm23935-201ENSMUST00000102303 57 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm24270-201ENSMUST00000102326 57 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm24245-201ENSMUST00000157318 57 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.28□□□□□ -0.12
Nkx3-2P97503 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx3-2P97503 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Nkx3-2P97503 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.27□□□□□ -0.13
Nkx3-2P97503 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.27□□□□□ -0.13
Nkx3-2P97503 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx3-2P97503 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx3-2P97503 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms