Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CiitaP79621 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CiitaP79621 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CiitaP79621 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.33■□□□□ 0.2
CiitaP79621 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CiitaP79621 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CiitaP79621 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CiitaP79621 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.33■□□□□ 0.2
CiitaP79621 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CiitaP79621 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.32■□□□□ 0.2
CiitaP79621 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CiitaP79621 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 Gm6973-201ENSMUST00000117080 721 ntBASIC16.32■□□□□ 0.2
CiitaP79621 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CiitaP79621 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CiitaP79621 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CiitaP79621 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CiitaP79621 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CiitaP79621 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CiitaP79621 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
CiitaP79621 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.31■□□□□ 0.2
CiitaP79621 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.31■□□□□ 0.2
CiitaP79621 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.31■□□□□ 0.2
CiitaP79621 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.31■□□□□ 0.2
CiitaP79621 Gm43474-201ENSMUST00000196415 774 ntBASIC16.31■□□□□ 0.2
CiitaP79621 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.31■□□□□ 0.2
CiitaP79621 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CiitaP79621 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CiitaP79621 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.3■□□□□ 0.2
CiitaP79621 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CiitaP79621 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms