Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Tpm1P58771 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
Tpm1P58771 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.87■□□□□ 0.29
Tpm1P58771 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.87■□□□□ 0.29
Tpm1P58771 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tpm1P58771 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tpm1P58771 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Tpm1P58771 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tpm1P58771 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Gm10013-201ENSMUST00000106074 672 ntBASIC16.86■□□□□ 0.29
Tpm1P58771 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tpm1P58771 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.86■□□□□ 0.29
Tpm1P58771 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.86■□□□□ 0.29
Tpm1P58771 Gm18032-201ENSMUST00000222541 538 ntBASIC16.86■□□□□ 0.29
Tpm1P58771 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tpm1P58771 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tpm1P58771 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.86■□□□□ 0.29
Tpm1P58771 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tpm1P58771 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tpm1P58771 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Tpm1P58771 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm6433-201ENSMUST00000118634 875 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm8825-201ENSMUST00000182565 998 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm4518-201ENSMUST00000182638 718 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.85■□□□□ 0.29
Tpm1P58771 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms