Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Gm17968-201ENSMUST00000194902 784 ntBASIC16.07■□□□□ 0.16
Uchl4P58321 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.07■□□□□ 0.16
Uchl4P58321 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.07■□□□□ 0.16
Uchl4P58321 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Uchl4P58321 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Uchl4P58321 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uchl4P58321 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.07■□□□□ 0.16
Uchl4P58321 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.06■□□□□ 0.16
Uchl4P58321 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm14822-201ENSMUST00000122247 291 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 Gm25911-201ENSMUST00000157621 56 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.06■□□□□ 0.16
Uchl4P58321 Mir8117-201ENSMUST00000184773 107 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Uchl4P58321 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Uchl4P58321 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.06■□□□□ 0.16
Uchl4P58321 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uchl4P58321 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.05■□□□□ 0.16
Uchl4P58321 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Uchl4P58321 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Uchl4P58321 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.05■□□□□ 0.16
Uchl4P58321 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.05■□□□□ 0.16
Uchl4P58321 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.05■□□□□ 0.16
Uchl4P58321 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Uchl4P58321 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.05■□□□□ 0.16
Uchl4P58321 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Uchl4P58321 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Uchl4P58321 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.04■□□□□ 0.16
Uchl4P58321 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Gm27702-201ENSMUST00000184512 56 ntBASIC16.04■□□□□ 0.16
Uchl4P58321 Gm44492-201ENSMUST00000197012 141 ntBASIC16.04■□□□□ 0.16
Uchl4P58321 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Uchl4P58321 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Uchl4P58321 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Uchl4P58321 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Uchl4P58321 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Uchl4P58321 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Uchl4P58321 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms