Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Psmc4P54775 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Gm7488-201ENSMUST00000117148 684 ntBASIC17.15■□□□□ 0.34
Psmc4P54775 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Psmc4P54775 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.15■□□□□ 0.34
Psmc4P54775 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Psmc4P54775 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Psmc4P54775 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Psmc4P54775 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Psmc4P54775 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Psmc4P54775 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Psmc4P54775 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Psmc4P54775 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Psmc4P54775 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Psmc4P54775 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.14■□□□□ 0.33
Psmc4P54775 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Psmc4P54775 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.14■□□□□ 0.33
Psmc4P54775 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.14■□□□□ 0.33
Psmc4P54775 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Psmc4P54775 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Psmc4P54775 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Psmc4P54775 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Psmc4P54775 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Psmc4P54775 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Psmc4P54775 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.13■□□□□ 0.33
Psmc4P54775 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Psmc4P54775 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Psmc4P54775 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Psmc4P54775 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Psmc4P54775 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Syt7-205ENSMUST00000224135 1557 ntBASIC17.12■□□□□ 0.33
Psmc4P54775 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.12■□□□□ 0.33
Psmc4P54775 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.12■□□□□ 0.33
Psmc4P54775 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.12■□□□□ 0.33
Psmc4P54775 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Psmc4P54775 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Psmc4P54775 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms