Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf9P41274 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf9P41274 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf9P41274 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tnfsf9P41274 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfsf9P41274 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf9P41274 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfsf9P41274 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Tnfsf9P41274 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
Tnfsf9P41274 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.45□□□□□ -0.1
Tnfsf9P41274 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Prob1-201ENSMUST00000097619 3021 ntBASIC14.45□□□□□ -0.1
Tnfsf9P41274 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfsf9P41274 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfsf9P41274 Sybu-209ENSMUST00000228639 4113 ntBASIC14.43□□□□□ -0.1
Tnfsf9P41274 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Gm16198-201ENSMUST00000118766 670 ntBASIC14.43□□□□□ -0.1
Tnfsf9P41274 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Gm45612-201ENSMUST00000211320 160 ntBASIC14.43□□□□□ -0.1
Tnfsf9P41274 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.43□□□□□ -0.1
Tnfsf9P41274 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tnfsf9P41274 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms