Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Upk2P38575 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Upk2P38575 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk2P38575 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Upk2P38575 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.25□□□□□ -0.29
Upk2P38575 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.25□□□□□ -0.29
Upk2P38575 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk2P38575 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Upk2P38575 Gm18195-201ENSMUST00000207604 706 ntBASIC13.25□□□□□ -0.29
Upk2P38575 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.25□□□□□ -0.29
Upk2P38575 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk2P38575 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.25□□□□□ -0.29
Upk2P38575 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.25□□□□□ -0.29
Upk2P38575 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk2P38575 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upk2P38575 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk2P38575 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Efs-202ENSMUST00000227037 2540 ntBASIC13.24□□□□□ -0.29
Upk2P38575 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.24□□□□□ -0.29
Upk2P38575 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.24□□□□□ -0.29
Upk2P38575 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.24□□□□□ -0.29
Upk2P38575 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk2P38575 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.24□□□□□ -0.29
Upk2P38575 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Gm4899-201ENSMUST00000178708 719 ntBASIC13.24□□□□□ -0.29
Upk2P38575 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk2P38575 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk2P38575 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Gm13036-201ENSMUST00000117799 748 ntBASIC13.23□□□□□ -0.29
Upk2P38575 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upk2P38575 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk2P38575 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.23□□□□□ -0.29
Upk2P38575 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.23□□□□□ -0.29
Upk2P38575 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.23□□□□□ -0.29
Upk2P38575 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.23□□□□□ -0.29
Upk2P38575 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upk2P38575 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms