Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.98□□□□□ -0.17
Foxa1P35582 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Foxa1P35582 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Foxa1P35582 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Foxa1P35582 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.98□□□□□ -0.17
Foxa1P35582 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxa1P35582 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxa1P35582 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.97□□□□□ -0.17
Foxa1P35582 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.97□□□□□ -0.17
Foxa1P35582 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxa1P35582 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Foxa1P35582 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxa1P35582 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxa1P35582 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Foxa1P35582 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Foxa1P35582 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Foxa1P35582 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Foxa1P35582 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.96□□□□□ -0.17
Foxa1P35582 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.96□□□□□ -0.17
Foxa1P35582 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.96□□□□□ -0.17
Foxa1P35582 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxa1P35582 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxa1P35582 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Foxa1P35582 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxa1P35582 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxa1P35582 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxa1P35582 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Gm13597-201ENSMUST00000121239 375 ntBASIC13.95□□□□□ -0.18
Foxa1P35582 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Foxa1P35582 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.95□□□□□ -0.18
Foxa1P35582 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxa1P35582 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Foxa1P35582 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms