Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.3■□□□□ 0.36
Vcam1P29533 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vcam1P29533 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.3■□□□□ 0.36
Vcam1P29533 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.3■□□□□ 0.36
Vcam1P29533 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Gm6888-201ENSMUST00000221983 706 ntBASIC17.3■□□□□ 0.36
Vcam1P29533 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.3■□□□□ 0.36
Vcam1P29533 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm8410-201ENSMUST00000117225 605 ntBASIC17.29■□□□□ 0.36
Vcam1P29533 Gm13453-201ENSMUST00000118708 357 ntBASIC17.29■□□□□ 0.36
Vcam1P29533 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.29■□□□□ 0.36
Vcam1P29533 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vcam1P29533 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.29■□□□□ 0.36
Vcam1P29533 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.29■□□□□ 0.36
Vcam1P29533 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
Vcam1P29533 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vcam1P29533 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vcam1P29533 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vcam1P29533 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vcam1P29533 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vcam1P29533 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
Vcam1P29533 Gm12428-201ENSMUST00000119844 727 ntBASIC17.28■□□□□ 0.36
Vcam1P29533 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Gm25144-201ENSMUST00000179561 110 ntBASIC17.28■□□□□ 0.36
Vcam1P29533 Gm25352-201ENSMUST00000179815 110 ntBASIC17.28■□□□□ 0.36
Vcam1P29533 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.28■□□□□ 0.36
Vcam1P29533 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.28■□□□□ 0.36
Vcam1P29533 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.28■□□□□ 0.36
Vcam1P29533 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vcam1P29533 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.28■□□□□ 0.36
Vcam1P29533 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.27■□□□□ 0.36
Vcam1P29533 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Vcam1P29533 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vcam1P29533 Gm13464-201ENSMUST00000119418 935 ntBASIC17.27■□□□□ 0.36
Vcam1P29533 Gm13823-201ENSMUST00000119930 345 ntBASIC17.27■□□□□ 0.36
Vcam1P29533 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.27■□□□□ 0.36
Vcam1P29533 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.27■□□□□ 0.36
Vcam1P29533 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcam1P29533 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Vcam1P29533 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.27■□□□□ 0.35
Vcam1P29533 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vcam1P29533 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
Vcam1P29533 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.26■□□□□ 0.35
Vcam1P29533 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms