Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.2□□□□□ -0.62
TbpP29037 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.2□□□□□ -0.62
TbpP29037 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.2□□□□□ -0.62
TbpP29037 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TbpP29037 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TbpP29037 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TbpP29037 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TbpP29037 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TbpP29037 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TbpP29037 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TbpP29037 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
TbpP29037 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Gm10849-201ENSMUST00000100397 618 ntBASIC11.19□□□□□ -0.62
TbpP29037 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
TbpP29037 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Mir6404-201ENSMUST00000183699 94 ntBASIC11.19□□□□□ -0.62
TbpP29037 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.19□□□□□ -0.62
TbpP29037 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.19□□□□□ -0.62
TbpP29037 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TbpP29037 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TbpP29037 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.18□□□□□ -0.62
TbpP29037 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.18□□□□□ -0.62
TbpP29037 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TbpP29037 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.18□□□□□ -0.62
TbpP29037 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.18□□□□□ -0.62
TbpP29037 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TbpP29037 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
TbpP29037 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TbpP29037 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TbpP29037 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TbpP29037 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TbpP29037 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms