Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm8097-201ENSMUST00000117903 829 ntBASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm15372-201ENSMUST00000120729 834 ntBASIC10.72□□□□□ -0.69
Sh2d1aO88890 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm12497-201ENSMUST00000138778 237 ntBASIC10.72□□□□□ -0.69
Sh2d1aO88890 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.72□□□□□ -0.69
Sh2d1aO88890 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.72□□□□□ -0.69
Sh2d1aO88890 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh2d1aO88890 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Gm19164-201ENSMUST00000210667 640 ntBASIC10.71□□□□□ -0.69
Sh2d1aO88890 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sh2d1aO88890 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sh2d1aO88890 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh2d1aO88890 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms