Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cops6O88545 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cops6O88545 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Cops6O88545 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.38■□□□□ 0.53
Cops6O88545 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.38■□□□□ 0.53
Cops6O88545 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.38■□□□□ 0.53
Cops6O88545 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cops6O88545 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.38■□□□□ 0.53
Cops6O88545 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cops6O88545 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cops6O88545 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cops6O88545 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.37■□□□□ 0.53
Cops6O88545 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.37■□□□□ 0.53
Cops6O88545 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cops6O88545 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cops6O88545 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cops6O88545 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cops6O88545 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cops6O88545 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.36■□□□□ 0.53
Cops6O88545 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cops6O88545 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.36■□□□□ 0.53
Cops6O88545 Gm27306-201ENSMUST00000183970 107 ntBASIC18.36■□□□□ 0.53
Cops6O88545 Gm17837-201ENSMUST00000186435 985 ntBASIC18.36■□□□□ 0.53
Cops6O88545 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cops6O88545 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.36■□□□□ 0.53
Cops6O88545 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cops6O88545 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cops6O88545 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Cops6O88545 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cops6O88545 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cops6O88545 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.35■□□□□ 0.53
Cops6O88545 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Gm12151-201ENSMUST00000121374 290 ntBASIC18.35■□□□□ 0.53
Cops6O88545 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Gm18766-201ENSMUST00000189811 808 ntBASIC18.35■□□□□ 0.53
Cops6O88545 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cops6O88545 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.35■□□□□ 0.53
Cops6O88545 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cops6O88545 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cops6O88545 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.35■□□□□ 0.53
Cops6O88545 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms