Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.98□□□□□ -0.17
Cops4O88544 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.98□□□□□ -0.17
Cops4O88544 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.98□□□□□ -0.17
Cops4O88544 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.98□□□□□ -0.17
Cops4O88544 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cops4O88544 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cops4O88544 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Cops4O88544 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cops4O88544 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cops4O88544 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cops4O88544 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cops4O88544 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.97□□□□□ -0.17
Cops4O88544 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cops4O88544 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.97□□□□□ -0.17
Cops4O88544 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.97□□□□□ -0.17
Cops4O88544 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cops4O88544 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cops4O88544 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops4O88544 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cops4O88544 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cops4O88544 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cops4O88544 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.96□□□□□ -0.17
Cops4O88544 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.96□□□□□ -0.17
Cops4O88544 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops4O88544 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cops4O88544 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops4O88544 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.96□□□□□ -0.18
Cops4O88544 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.96□□□□□ -0.18
Cops4O88544 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops4O88544 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cops4O88544 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops4O88544 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.96□□□□□ -0.18
Cops4O88544 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.96□□□□□ -0.18
Cops4O88544 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops4O88544 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.18
Cops4O88544 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.95□□□□□ -0.18
Cops4O88544 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms