Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sgo2bJ3QMK1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sgo2bJ3QMK1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sgo2bJ3QMK1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Efs-202ENSMUST00000227037 2540 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm7222-201ENSMUST00000117512 906 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm7230-201ENSMUST00000173026 815 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm28659-201ENSMUST00000188013 759 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sgo2bJ3QMK1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Gm9682-201ENSMUST00000197505 556 ntBASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sgo2bJ3QMK1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms