Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Gm12350-201ENSMUST00000121208 462 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Gm2651-201ENSMUST00000203560 838 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Gm18246-201ENSMUST00000221023 728 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Mzt1-203ENSMUST00000227948 952 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Efs-202ENSMUST00000227037 2540 ntBASIC13.28□□□□□ -0.28
Trav13d-3J3QMG8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.27□□□□□ -0.28
Trav13d-3J3QMG8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-3J3QMG8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms