Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf4lE9Q2N0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm43767-201ENSMUST00000198933 381 ntBASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm18206-201ENSMUST00000207027 926 ntBASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf4lE9Q2N0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4lE9Q2N0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms