Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav12-1A0N8R1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Gm27704-201ENSMUST00000185094 107 ntBASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-1A0N8R1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-1A0N8R1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms