Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm9013-201ENSMUST00000132939 882 ntBASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mir6982-201ENSMUST00000184354 68 ntBASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm18032-201ENSMUST00000222541 538 ntBASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm8825-201ENSMUST00000182565 998 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm4518-201ENSMUST00000182638 718 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.42□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms