Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16A0A075B653 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.71□□□□□ -0.53
Trav16A0A075B653 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16A0A075B653 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.71□□□□□ -0.54
Trav16A0A075B653 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.71□□□□□ -0.54
Trav16A0A075B653 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav16A0A075B653 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Gm27011-201ENSMUST00000182352 972 ntBASIC11.7□□□□□ -0.54
Trav16A0A075B653 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.7□□□□□ -0.54
Trav16A0A075B653 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16A0A075B653 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav16A0A075B653 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms