Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm10052-201ENSMUST00000168019 960 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm3375-201ENSMUST00000203929 796 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm7729-201ENSMUST00000050143 801 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.46□□□□□ -0.57
Trav7n-4A0A075B620 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav7n-4A0A075B620 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Mir1199-201ENSMUST00000117015 119 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm37856-201ENSMUST00000191634 999 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm44430-201ENSMUST00000203376 995 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gm10566-201ENSMUST00000086739 996 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7n-4A0A075B620 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms