Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nr1h3Q9Z0Y9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm10499-201ENSMUST00000174094 934 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm43474-201ENSMUST00000196415 774 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm20553-201ENSMUST00000204205 844 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nr1h3Q9Z0Y9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm43125-201ENSMUST00000201724 730 ntBASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms