Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn8aQ9WTU3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn8aQ9WTU3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn8aQ9WTU3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms