Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smco4Q9JIS3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Gm17661-201ENSMUST00000170317 270 ntBASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smco4Q9JIS3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smco4Q9JIS3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Gm12008-201ENSMUST00000117791 755 ntBASIC12.17□□□□□ -0.46
Smco4Q9JIS3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms