Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppp1r3fQ9JIG4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm44492-201ENSMUST00000197012 141 ntBASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm5312-201ENSMUST00000203728 547 ntBASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppp1r3fQ9JIG4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppp1r3fQ9JIG4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm44487-201ENSMUST00000205145 325 ntBASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppp1r3fQ9JIG4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ppp1r3fQ9JIG4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ppp1r3fQ9JIG4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ppp1r3fQ9JIG4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
Ppp1r3fQ9JIG4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ppp1r3fQ9JIG4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.14■□□□□ 0.65
Ppp1r3fQ9JIG4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ppp1r3fQ9JIG4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r3fQ9JIG4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r3fQ9JIG4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r3fQ9JIG4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppp1r3fQ9JIG4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms