Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Mir6990-201ENSMUST00000183724 91 ntBASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3bQ9ES34 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3bQ9ES34 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Ube3bQ9ES34 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms