Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.09□□□□□ -0.31
Ssmem1Q9D9Y8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssmem1Q9D9Y8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ssmem1Q9D9Y8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Gm13597-201ENSMUST00000121239 375 ntBASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.08□□□□□ -0.32
Ssmem1Q9D9Y8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ssmem1Q9D9Y8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssmem1Q9D9Y8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms